Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN5P54829 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN5P54829 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PTPN5P54829 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN5P54829 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 TSEN15P1-201ENST00000423257 515 ntBASIC18.3■□□□□ 0.52
PTPN5P54829 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN5P54829 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN5P54829 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.3■□□□□ 0.52
PTPN5P54829 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN5P54829 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN5P54829 AC244517.3-201ENST00000616254 1235 ntBASIC18.3■□□□□ 0.52
PTPN5P54829 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTPN5P54829 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN5P54829 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.3■□□□□ 0.52
PTPN5P54829 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN5P54829 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN5P54829 GMCL1P1-201ENST00000463439 1581 ntBASIC18.3■□□□□ 0.52
PTPN5P54829 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN5P54829 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN5P54829 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.29■□□□□ 0.52
PTPN5P54829 LAGE3P1-201ENST00000425356 484 ntBASIC18.29■□□□□ 0.52
PTPN5P54829 HLA-V-201ENST00000429037 534 ntBASIC18.29■□□□□ 0.52
PTPN5P54829 AC007274.1-201ENST00000439805 662 ntBASIC18.29■□□□□ 0.52
PTPN5P54829 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN5P54829 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN5P54829 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.29■□□□□ 0.52
PTPN5P54829 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN5P54829 AC093512.1-201ENST00000617969 520 ntBASIC18.29■□□□□ 0.52
PTPN5P54829 AL513190.1-201ENST00000621254 727 ntBASIC18.29■□□□□ 0.52
PTPN5P54829 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTPN5P54829 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTPN5P54829 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN5P54829 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN5P54829 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN5P54829 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 ELL2P1-201ENST00000413990 1906 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 AC015922.1-201ENST00000421102 1152 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN5P54829 CEND1P1-201ENST00000451006 455 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN5P54829 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN5P54829 MTDHP4-201ENST00000600287 670 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 AC012645.4-201ENST00000610691 1061 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN5P54829 PGM5P2-202ENST00000637225 1043 ntBASIC18.28■□□□□ 0.52
PTPN5P54829 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN5P54829 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN5P54829 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTPN5P54829 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms