Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RAD23BP54727 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.99■□□□□ 0.63
RAD23BP54727 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.99■□□□□ 0.63
RAD23BP54727 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.99■□□□□ 0.63
RAD23BP54727 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.99■□□□□ 0.63
RAD23BP54727 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.99■□□□□ 0.63
RAD23BP54727 AL138831.2-201ENST00000606564 490 ntBASIC18.99■□□□□ 0.63
RAD23BP54727 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.99■□□□□ 0.63
RAD23BP54727 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RAD23BP54727 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.99■□□□□ 0.63
RAD23BP54727 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD23BP54727 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
RAD23BP54727 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD23BP54727 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD23BP54727 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD23BP54727 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 AC096633.1-201ENST00000422446 749 ntBASIC18.98■□□□□ 0.63
RAD23BP54727 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 KRT17P6-201ENST00000453795 1220 ntBASIC18.98■□□□□ 0.63
RAD23BP54727 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.98■□□□□ 0.63
RAD23BP54727 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.98■□□□□ 0.63
RAD23BP54727 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RAD23BP54727 AC116407.2-201ENST00000613639 860 ntBASIC18.98■□□□□ 0.63
RAD23BP54727 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAD23BP54727 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 AC097374.2-201ENST00000618617 1306 ntBASIC18.98■□□□□ 0.63
RAD23BP54727 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD23BP54727 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAD23BP54727 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RAD23BP54727 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.98■□□□□ 0.63
RAD23BP54727 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 AC139713.2-201ENST00000641328 2723 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 IGHV3-47-201ENST00000425060 335 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 VENTXP7-201ENST00000475503 772 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.97■□□□□ 0.63
RAD23BP54727 AP000867.3-201ENST00000524675 377 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.97■□□□□ 0.63
RAD23BP54727 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAD23BP54727 Z69720.1-201ENST00000601483 472 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 AC067852.2-201ENST00000590513 2313 ntBASIC18.97■□□□□ 0.63
RAD23BP54727 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD23BP54727 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAD23BP54727 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAD23BP54727 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.96■□□□□ 0.63
RAD23BP54727 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD23BP54727 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD23BP54727 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms