Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.92■□□□□ 0.46
LIMK2P53671 AC016734.2-201ENST00000624325 1377 ntBASIC17.91■□□□□ 0.46
LIMK2P53671 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 AL138688.1-201ENST00000624851 1594 ntBASIC17.91■□□□□ 0.46
LIMK2P53671 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
LIMK2P53671 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.91■□□□□ 0.46
LIMK2P53671 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.91■□□□□ 0.46
LIMK2P53671 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.91■□□□□ 0.46
LIMK2P53671 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.91■□□□□ 0.46
LIMK2P53671 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LIMK2P53671 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIMK2P53671 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.9■□□□□ 0.46
LIMK2P53671 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 MIR662-201ENST00000384847 95 ntBASIC17.9■□□□□ 0.46
LIMK2P53671 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.9■□□□□ 0.46
LIMK2P53671 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.9■□□□□ 0.46
LIMK2P53671 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
LIMK2P53671 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.9■□□□□ 0.46
LIMK2P53671 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.9■□□□□ 0.46
LIMK2P53671 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.9■□□□□ 0.46
LIMK2P53671 AC092329.2-201ENST00000598402 547 ntBASIC17.9■□□□□ 0.46
LIMK2P53671 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 LINC00602-201ENST00000629776 2065 ntBASIC17.9■□□□□ 0.46
LIMK2P53671 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 LINC00304-203ENST00000565008 1864 ntBASIC17.9■□□□□ 0.46
LIMK2P53671 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.9■□□□□ 0.46
LIMK2P53671 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIMK2P53671 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LIMK2P53671 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LIMK2P53671 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LIMK2P53671 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LIMK2P53671 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
LIMK2P53671 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LIMK2P53671 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 AC113404.2-201ENST00000507884 177 ntBASIC17.89■□□□□ 0.45
LIMK2P53671 KRT8P26-201ENST00000534154 1276 ntBASIC17.89■□□□□ 0.45
LIMK2P53671 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LIMK2P53671 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LIMK2P53671 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIMK2P53671 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms