Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA4P51532 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA4P51532 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 IGHV3-52-201ENST00000519770 353 ntBASIC31.47■■■□□ 2.63
SMARCA4P51532 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCA4P51532 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC31.47■■■□□ 2.63
SMARCA4P51532 AP001059.3-201ENST00000619053 235 ntBASIC31.47■■■□□ 2.63
SMARCA4P51532 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC31.47■■■□□ 2.63
SMARCA4P51532 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA4P51532 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC236430.1-201ENST00000402231 743 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC190387.1-201ENST00000551683 408 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 THTPA-204ENST00000554970 569 ntTSL 4 BASIC31.46■■■□□ 2.63
SMARCA4P51532 THTPA-206ENST00000556015 535 ntTSL 3 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC31.46■■■□□ 2.63
SMARCA4P51532 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC31.46■■■□□ 2.63
SMARCA4P51532 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC015922.1-201ENST00000421102 1152 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 GSAP-205ENST00000430584 600 ntTSL 5 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC002472.2-201ENST00000442739 958 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 CNN2P2-201ENST00000443536 909 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 CNN2P3-201ENST00000450201 906 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC31.46■■■□□ 2.63
SMARCA4P51532 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC31.46■■■□□ 2.63
SMARCA4P51532 AL136317.3-201ENST00000618497 906 ntBASIC31.46■■■□□ 2.63
SMARCA4P51532 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA4P51532 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA4P51532 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC31.45■■■□□ 2.63
SMARCA4P51532 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA4P51532 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.45■■■□□ 2.63
SMARCA4P51532 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC31.45■■■□□ 2.63
SMARCA4P51532 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC31.45■■■□□ 2.63
SMARCA4P51532 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.45■■■□□ 2.63
SMARCA4P51532 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCA4P51532 PI4KAP1-204ENST00000612579 1703 ntBASIC31.45■■■□□ 2.63
SMARCA4P51532 EFTUD1P1-204ENST00000560401 1798 ntBASIC31.45■■■□□ 2.62
SMARCA4P51532 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC31.45■■■□□ 2.62
SMARCA4P51532 METTL26-204ENST00000397665 558 ntTSL 2 BASIC31.45■■■□□ 2.62
SMARCA4P51532 FAM185BP-201ENST00000443595 716 ntBASIC31.45■■■□□ 2.62
SMARCA4P51532 UGT1A2P-201ENST00000454886 866 ntBASIC31.45■■■□□ 2.62
SMARCA4P51532 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
SMARCA4P51532 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SMARCA4P51532 POLD4-211ENST00000539074 714 ntTSL 3 BASIC31.45■■■□□ 2.62
SMARCA4P51532 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC31.45■■■□□ 2.62
SMARCA4P51532 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
SMARCA4P51532 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC31.45■■■□□ 2.62
SMARCA4P51532 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA4P51532 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCA4P51532 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA4P51532 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
SMARCA4P51532 INO80E-210ENST00000567705 880 ntTSL 3 BASIC31.44■■■□□ 2.62
SMARCA4P51532 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA4P51532 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC31.44■■■□□ 2.62
SMARCA4P51532 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCA4P51532 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
SMARCA4P51532 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA4P51532 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC31.44■■■□□ 2.62
SMARCA4P51532 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA4P51532 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCA4P51532 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC31.43■■■□□ 2.62
SMARCA4P51532 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC31.43■■■□□ 2.62
SMARCA4P51532 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC31.43■■■□□ 2.62
SMARCA4P51532 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC31.43■■■□□ 2.62
SMARCA4P51532 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SMARCA4P51532 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA4P51532 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC31.42■■■□□ 2.62
SMARCA4P51532 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SMARCA4P51532 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC31.42■■■□□ 2.62
SMARCA4P51532 AL135744.1-201ENST00000565098 629 ntBASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms