Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC1A2P43004 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A2P43004 AC068472.1-201ENST00000474589 881 ntBASIC17.71■□□□□ 0.43
SLC1A2P43004 DUX4L26-201ENST00000489078 1255 ntBASIC17.71■□□□□ 0.43
SLC1A2P43004 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A2P43004 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A2P43004 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC1A2P43004 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A2P43004 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.71■□□□□ 0.42
SLC1A2P43004 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC1A2P43004 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A2P43004 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 AC080080.1-201ENST00000625121 2420 ntBASIC17.7■□□□□ 0.42
SLC1A2P43004 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A2P43004 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A2P43004 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 AL671277.2-201ENST00000458060 996 ntBASIC17.7■□□□□ 0.42
SLC1A2P43004 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A2P43004 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.7■□□□□ 0.42
SLC1A2P43004 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A2P43004 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A2P43004 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A2P43004 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A2P43004 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC1A2P43004 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A2P43004 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A2P43004 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 BX276092.7-203ENST00000637198 1536 ntBASIC17.69■□□□□ 0.42
SLC1A2P43004 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A2P43004 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A2P43004 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC1A2P43004 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A2P43004 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A2P43004 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A2P43004 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
SLC1A2P43004 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A2P43004 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A2P43004 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A2P43004 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A2P43004 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms