Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.71■□□□□ 0.59
GRIK1P39086 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
GRIK1P39086 AC138028.4-201ENST00000564984 1845 ntBASIC18.71■□□□□ 0.59
GRIK1P39086 AC009949.1-201ENST00000623048 1830 ntBASIC18.71■□□□□ 0.59
GRIK1P39086 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GRIK1P39086 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.71■□□□□ 0.59
GRIK1P39086 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GRIK1P39086 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.71■□□□□ 0.59
GRIK1P39086 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GRIK1P39086 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
GRIK1P39086 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.7■□□□□ 0.58
GRIK1P39086 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.7■□□□□ 0.58
GRIK1P39086 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.7■□□□□ 0.58
GRIK1P39086 MRPL3P1-201ENST00000400109 1033 ntBASIC18.7■□□□□ 0.58
GRIK1P39086 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.7■□□□□ 0.58
GRIK1P39086 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.7■□□□□ 0.58
GRIK1P39086 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 FGFR3P6-201ENST00000457012 610 ntBASIC18.7■□□□□ 0.58
GRIK1P39086 SCARNA2-201ENST00000458748 420 ntBASIC18.7■□□□□ 0.58
GRIK1P39086 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
GRIK1P39086 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.7■□□□□ 0.58
GRIK1P39086 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.7■□□□□ 0.58
GRIK1P39086 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GRIK1P39086 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
GRIK1P39086 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
GRIK1P39086 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
GRIK1P39086 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GRIK1P39086 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.69■□□□□ 0.58
GRIK1P39086 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GRIK1P39086 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GRIK1P39086 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 SLC25A6P4-201ENST00000586535 553 ntBASIC18.69■□□□□ 0.58
GRIK1P39086 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 AC064862.7-201ENST00000604520 867 ntBASIC18.69■□□□□ 0.58
GRIK1P39086 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.69■□□□□ 0.58
GRIK1P39086 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.69■□□□□ 0.58
GRIK1P39086 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
GRIK1P39086 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GRIK1P39086 SIRPAP1-201ENST00000448467 1770 ntBASIC18.68■□□□□ 0.58
GRIK1P39086 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.68■□□□□ 0.58
GRIK1P39086 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms