Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RPA3P35244 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
RPA3P35244 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.96■□□□□ 0.47
RPA3P35244 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.96■□□□□ 0.47
RPA3P35244 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.96■□□□□ 0.47
RPA3P35244 DUTP2-201ENST00000519164 463 ntBASIC17.96■□□□□ 0.47
RPA3P35244 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.96■□□□□ 0.47
RPA3P35244 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RPA3P35244 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 LINC00304-203ENST00000565008 1864 ntBASIC17.96■□□□□ 0.47
RPA3P35244 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 KRT8P7-201ENST00000533003 1432 ntBASIC17.96■□□□□ 0.47
RPA3P35244 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RPA3P35244 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPA3P35244 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RPA3P35244 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
RPA3P35244 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.96■□□□□ 0.46
RPA3P35244 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
RPA3P35244 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.95■□□□□ 0.46
RPA3P35244 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 BX664615.1-201ENST00000443558 458 ntBASIC17.95■□□□□ 0.46
RPA3P35244 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.95■□□□□ 0.46
RPA3P35244 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.95■□□□□ 0.46
RPA3P35244 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.95■□□□□ 0.46
RPA3P35244 AC140113.3-201ENST00000605663 199 ntBASIC17.95■□□□□ 0.46
RPA3P35244 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.95■□□□□ 0.46
RPA3P35244 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPA3P35244 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.95■□□□□ 0.46
RPA3P35244 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.95■□□□□ 0.46
RPA3P35244 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 COX11P1-201ENST00000489116 835 ntBASIC17.94■□□□□ 0.46
RPA3P35244 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 AC092865.7-201ENST00000641832 219 ntBASIC17.94■□□□□ 0.46
RPA3P35244 AC073508.3-201ENST00000619697 1419 ntBASIC17.94■□□□□ 0.46
RPA3P35244 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPA3P35244 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.94■□□□□ 0.46
RPA3P35244 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.94■□□□□ 0.46
RPA3P35244 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPA3P35244 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms