Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-1320P-201ENST00000390838 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-1269P-201ENST00000391139 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.07■□□□□ 0.64
HOXD11P31277 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXD11P31277 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-599P-201ENST00000459383 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-1193P-201ENST00000459461 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 AC010468.1-201ENST00000461022 817 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXD11P31277 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.07■□□□□ 0.64
HOXD11P31277 AC034205.1-201ENST00000520621 638 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 EIF4EP5-201ENST00000528228 640 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 AC139697.1-201ENST00000548429 745 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 AF129408.1-201ENST00000608767 431 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXD11P31277 HULC.1-201ENST00000612720 240 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.07■□□□□ 0.64
HOXD11P31277 U6.42-201ENST00000618440 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-368P-201ENST00000620928 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 RNU6-538P-201ENST00000622329 107 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 AC099552.4-201ENST00000624248 949 ntBASIC19.07■□□□□ 0.64
HOXD11P31277 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
HOXD11P31277 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXD11P31277 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HOXD11P31277 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 AL008638.4-201ENST00000624792 1315 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HOXD11P31277 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXD11P31277 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HOXD11P31277 RN7SKP230-201ENST00000365642 335 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AL121978.1-201ENST00000402778 359 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AL645939.2-201ENST00000427340 991 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AC073648.4-201ENST00000442655 781 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AP006288.1-201ENST00000446065 395 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 MTCO2P7-201ENST00000446518 666 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 RAP1BP2-201ENST00000478270 544 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 CREM-237ENST00000488328 1049 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HOXD11P31277 LINC02152-201ENST00000566208 1281 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXD11P31277 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXD11P31277 AC092159.4-201ENST00000624944 550 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AL121594.5-201ENST00000631724 573 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HOXD11P31277 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXD11P31277 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.06■□□□□ 0.64
HOXD11P31277 KRT16P6-202ENST00000425692 1426 ntBASIC19.06■□□□□ 0.64
HOXD11P31277 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXD11P31277 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 AC018717.1-201ENST00000457712 1505 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 AL138831.3-201ENST00000623656 1458 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.05■□□□□ 0.64
HOXD11P31277 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 KIF3AP1-201ENST00000454055 611 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC19.05■□□□□ 0.64
HOXD11P31277 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms