Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP24386 AC116407.4-201ENST00000623319 1061 ntBASIC16.63■□□□□ 0.25
CHMP24386 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHMP24386 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 IER3-202ENST00000376377 1350 ntBASIC16.63■□□□□ 0.25
CHMP24386 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 SPDYE13P-201ENST00000445314 798 ntBASIC16.62■□□□□ 0.25
CHMP24386 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP24386 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP24386 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP24386 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP24386 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP24386 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP24386 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP24386 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP24386 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 AC093010.1-201ENST00000473625 1624 ntBASIC16.61■□□□□ 0.25
CHMP24386 MIR149-201ENST00000384879 89 ntBASIC16.61■□□□□ 0.25
CHMP24386 UPK3BP1-201ENST00000428678 509 ntBASIC16.61■□□□□ 0.25
CHMP24386 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP24386 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CHMP24386 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP24386 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP24386 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP24386 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
CHMP24386 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP24386 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP24386 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms