Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CAPN3P20807 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CAPN3P20807 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.12■□□□□ 0.33
CAPN3P20807 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.12■□□□□ 0.33
CAPN3P20807 AC009947.2-201ENST00000444014 672 ntBASIC17.12■□□□□ 0.33
CAPN3P20807 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN3P20807 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN3P20807 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPN3P20807 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CAPN3P20807 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CAPN3P20807 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN3P20807 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN3P20807 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPN3P20807 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.11■□□□□ 0.33
CAPN3P20807 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.11■□□□□ 0.33
CAPN3P20807 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.11■□□□□ 0.33
CAPN3P20807 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPN3P20807 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN3P20807 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN3P20807 REXO1L11P-201ENST00000620964 1927 ntBASIC17.11■□□□□ 0.33
CAPN3P20807 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN3P20807 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN3P20807 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CAPN3P20807 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN3P20807 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN3P20807 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN3P20807 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms