Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 CICP14-201ENST00000629111 2732 ntBASIC13.64□□□□□ -0.23
RAB4AP20338 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.64□□□□□ -0.23
RAB4AP20338 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 HEIH-201ENST00000623091 1652 ntBASIC13.64□□□□□ -0.23
RAB4AP20338 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB4AP20338 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 TSPY21P-201ENST00000433481 731 ntBASIC13.64□□□□□ -0.23
RAB4AP20338 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB4AP20338 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB4AP20338 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 AL499627.1-201ENST00000569373 2188 ntBASIC13.64□□□□□ -0.23
RAB4AP20338 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.63□□□□□ -0.23
RAB4AP20338 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.63□□□□□ -0.23
RAB4AP20338 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 AC005829.2-201ENST00000571422 1056 ntBASIC13.63□□□□□ -0.23
RAB4AP20338 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB4AP20338 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RAB4AP20338 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB4AP20338 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB4AP20338 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RAB4AP20338 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB4AP20338 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB4AP20338 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB4AP20338 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB4AP20338 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms