Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC096633.1-201ENST00000422446 749 ntBASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DPA1P20036 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 AC246785.2-201ENST00000432512 513 ntBASIC17.94■□□□□ 0.46
HLA-DPA1P20036 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 AC097374.2-201ENST00000618617 1306 ntBASIC17.94■□□□□ 0.46
HLA-DPA1P20036 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPA1P20036 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
HLA-DPA1P20036 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 TSSC2-201ENST00000450217 709 ntBASIC17.93■□□□□ 0.46
HLA-DPA1P20036 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 AC011840.4-201ENST00000578471 627 ntBASIC17.93■□□□□ 0.46
HLA-DPA1P20036 AC091076.1-201ENST00000610741 619 ntBASIC17.93■□□□□ 0.46
HLA-DPA1P20036 AL358472.4-201ENST00000633140 710 ntBASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPA1P20036 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 AL845331.1-201ENST00000424978 1190 ntBASIC17.92■□□□□ 0.46
HLA-DPA1P20036 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 VENTXP7-201ENST00000475503 772 ntBASIC17.92■□□□□ 0.46
HLA-DPA1P20036 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms