Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM21P19474 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 DUTP2-201ENST00000519164 463 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 AC087388.1-201ENST00000571370 1112 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TRIM21P19474 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 AC010331.1-201ENST00000611423 582 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 AC100803.2-201ENST00000562459 1963 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM21P19474 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM21P19474 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM21P19474 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 PRORSD1P-202ENST00000563365 2154 ntBASIC19.61■□□□□ 0.73
TRIM21P19474 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRIM21P19474 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 AL671277.2-201ENST00000458060 996 ntBASIC19.61■□□□□ 0.73
TRIM21P19474 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM21P19474 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 AL157888.1-201ENST00000631930 593 ntBASIC19.61■□□□□ 0.73
TRIM21P19474 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM21P19474 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM21P19474 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM21P19474 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 PVRIG2P-201ENST00000435460 978 ntBASIC19.6■□□□□ 0.73
TRIM21P19474 AC112907.2-201ENST00000448639 330 ntBASIC19.6■□□□□ 0.73
TRIM21P19474 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM21P19474 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM21P19474 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM21P19474 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM21P19474 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM21P19474 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM21P19474 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM21P19474 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM21P19474 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM21P19474 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM21P19474 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM21P19474 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM21P19474 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM21P19474 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM21P19474 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM21P19474 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM21P19474 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM21P19474 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRIM21P19474 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM21P19474 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM21P19474 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM21P19474 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms