Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN1P18031 AC079781.3-201ENST00000449110 356 ntBASIC18.8■□□□□ 0.6
PTPN1P18031 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN1P18031 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PTPN1P18031 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN1P18031 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 AL031008.1-201ENST00000619963 541 ntBASIC18.8■□□□□ 0.6
PTPN1P18031 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PTPN1P18031 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN1P18031 BX276092.7-203ENST00000637198 1536 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN1P18031 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 AC103564.2-201ENST00000432853 1299 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN1P18031 AC106795.1-205ENST00000512851 1056 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
PTPN1P18031 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.79■□□□□ 0.6
PTPN1P18031 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 AC104692.2-201ENST00000603054 253 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 AL121912.1-201ENST00000603683 238 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN1P18031 AP005117.1-201ENST00000584346 1413 ntBASIC18.79■□□□□ 0.6
PTPN1P18031 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN1P18031 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PTPN1P18031 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN1P18031 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN1P18031 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 SIRPAP1-201ENST00000448467 1770 ntBASIC18.78■□□□□ 0.6
PTPN1P18031 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN1P18031 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PTPN1P18031 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPN1P18031 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN1P18031 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
PTPN1P18031 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN1P18031 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN1P18031 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN1P18031 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTPN1P18031 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN1P18031 RBM17P3-201ENST00000417687 1192 ntBASIC18.77■□□□□ 0.6
PTPN1P18031 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms