Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC30.14■■■□□ 2.42
CFTRP13569 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC30.14■■■□□ 2.42
CFTRP13569 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC30.14■■■□□ 2.42
CFTRP13569 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC30.14■■■□□ 2.42
CFTRP13569 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFTRP13569 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
CFTRP13569 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC30.14■■■□□ 2.41
CFTRP13569 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC30.14■■■□□ 2.41
CFTRP13569 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CFTRP13569 AC126763.1-201ENST00000552015 2118 ntBASIC30.13■■■□□ 2.41
CFTRP13569 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFTRP13569 AL031598.1-201ENST00000561511 1773 ntBASIC30.13■■■□□ 2.41
CFTRP13569 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFTRP13569 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC30.13■■■□□ 2.41
CFTRP13569 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CFTRP13569 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
CFTRP13569 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFTRP13569 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFTRP13569 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC30.13■■■□□ 2.41
CFTRP13569 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFTRP13569 EFTUD1P1-204ENST00000560401 1798 ntBASIC30.13■■■□□ 2.41
CFTRP13569 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC30.12■■■□□ 2.41
CFTRP13569 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 RN7SL589P-201ENST00000481268 310 ntBASIC30.12■■■□□ 2.41
CFTRP13569 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC30.12■■■□□ 2.41
CFTRP13569 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CFTRP13569 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC30.12■■■□□ 2.41
CFTRP13569 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC30.12■■■□□ 2.41
CFTRP13569 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC30.12■■■□□ 2.41
CFTRP13569 VMA21-202ENST00000370361 693 ntTSL 5 BASIC30.12■■■□□ 2.41
CFTRP13569 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFTRP13569 HNRNPFP1-201ENST00000391730 1133 ntBASIC30.12■■■□□ 2.41
CFTRP13569 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC30.12■■■□□ 2.41
CFTRP13569 KLF2P3-201ENST00000451977 1087 ntBASIC30.12■■■□□ 2.41
CFTRP13569 AC087163.2-201ENST00000457299 853 ntBASIC30.12■■■□□ 2.41
CFTRP13569 AC079140.1-201ENST00000508039 487 ntBASIC30.12■■■□□ 2.41
CFTRP13569 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC30.12■■■□□ 2.41
CFTRP13569 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC30.12■■■□□ 2.41
CFTRP13569 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC30.11■■■□□ 2.41
CFTRP13569 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 TFAMP1-201ENST00000412727 736 ntBASIC30.11■■■□□ 2.41
CFTRP13569 KRT18P32-201ENST00000424695 1287 ntBASIC30.11■■■□□ 2.41
CFTRP13569 INGX-202ENST00000489074 768 ntBASIC30.11■■■□□ 2.41
CFTRP13569 IGHV3-52-201ENST00000519770 353 ntBASIC30.11■■■□□ 2.41
CFTRP13569 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC30.11■■■□□ 2.41
CFTRP13569 THTPA-204ENST00000554970 569 ntTSL 4 BASIC30.11■■■□□ 2.41
CFTRP13569 THTPA-206ENST00000556015 535 ntTSL 3 BASIC30.11■■■□□ 2.41
CFTRP13569 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC30.11■■■□□ 2.41
CFTRP13569 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFTRP13569 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC30.1■■■□□ 2.41
CFTRP13569 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CFTRP13569 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 BASP1P1-201ENST00000430708 665 ntBASIC30.1■■■□□ 2.41
CFTRP13569 AC107918.2-201ENST00000530817 355 ntBASIC30.1■■■□□ 2.41
CFTRP13569 TSFM-210ENST00000550559 897 ntTSL 5 BASIC30.1■■■□□ 2.41
CFTRP13569 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC30.1■■■□□ 2.41
CFTRP13569 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC30.1■■■□□ 2.41
CFTRP13569 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
CFTRP13569 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFTRP13569 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
CFTRP13569 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC30.09■■■□□ 2.41
CFTRP13569 AC007274.1-201ENST00000439805 662 ntBASIC30.09■■■□□ 2.41
CFTRP13569 SPDYE11-202ENST00000450699 704 ntBASIC30.09■■■□□ 2.41
CFTRP13569 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC30.09■■■□□ 2.41
CFTRP13569 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC30.09■■■□□ 2.41
CFTRP13569 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CFTRP13569 AC243562.1-201ENST00000560672 389 ntBASIC30.09■■■□□ 2.41
CFTRP13569 SPDYE9P-201ENST00000570642 692 ntBASIC30.09■■■□□ 2.41
CFTRP13569 SPDYE10P-202ENST00000612005 668 ntBASIC30.09■■■□□ 2.41
CFTRP13569 SPDYE8P-202ENST00000612377 668 ntBASIC30.09■■■□□ 2.41
CFTRP13569 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CFTRP13569 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFTRP13569 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms