Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXD8P13378 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
HOXD8P13378 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HOXD8P13378 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXD8P13378 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HOXD8P13378 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXD8P13378 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HOXD8P13378 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HOXD8P13378 AC090164.3-201ENST00000610780 2143 ntBASIC19.48■□□□□ 0.71
HOXD8P13378 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXD8P13378 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HOXD8P13378 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXD8P13378 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXD8P13378 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXD8P13378 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HOXD8P13378 AC097637.2-201ENST00000624096 1997 ntBASIC19.47■□□□□ 0.71
HOXD8P13378 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXD8P13378 LINC00982-205ENST00000420957 435 ntBASIC19.47■□□□□ 0.71
HOXD8P13378 YBX1P5-201ENST00000509441 847 ntBASIC19.47■□□□□ 0.71
HOXD8P13378 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXD8P13378 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXD8P13378 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.47■□□□□ 0.71
HOXD8P13378 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXD8P13378 AC010654.1-201ENST00000615722 808 ntBASIC19.47■□□□□ 0.71
HOXD8P13378 AC004790.2-201ENST00000623588 572 ntBASIC19.47■□□□□ 0.71
HOXD8P13378 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HOXD8P13378 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HOXD8P13378 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HOXD8P13378 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD8P13378 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 PTCHD3P3-201ENST00000403073 906 ntBASIC19.46■□□□□ 0.71
HOXD8P13378 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXD8P13378 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXD8P13378 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HOXD8P13378 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.46■□□□□ 0.71
HOXD8P13378 OR7E47P-204ENST00000575924 449 ntBASIC19.46■□□□□ 0.71
HOXD8P13378 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HOXD8P13378 AC134684.3-201ENST00000641758 218 ntBASIC19.46■□□□□ 0.71
HOXD8P13378 AC092865.6-201ENST00000642101 219 ntBASIC19.46■□□□□ 0.71
HOXD8P13378 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HOXD8P13378 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD8P13378 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD8P13378 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HOXD8P13378 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 ACTG1P4-201ENST00000425123 1122 ntBASIC19.45■□□□□ 0.7
HOXD8P13378 AP006288.1-201ENST00000446065 395 ntBASIC19.45■□□□□ 0.7
HOXD8P13378 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD8P13378 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD8P13378 MIR4751-201ENST00000578027 74 ntBASIC19.45■□□□□ 0.7
HOXD8P13378 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD8P13378 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD8P13378 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
HOXD8P13378 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD8P13378 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD8P13378 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD8P13378 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD8P13378 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD8P13378 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms