Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 LINC00304-203ENST00000565008 1864 ntBASIC15.61■□□□□ 0.09
UBCP0CG48 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBCP0CG48 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
UBCP0CG48 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.61■□□□□ 0.09
UBCP0CG48 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.61■□□□□ 0.09
UBCP0CG48 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBCP0CG48 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.61■□□□□ 0.09
UBCP0CG48 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.61■□□□□ 0.09
UBCP0CG48 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
UBCP0CG48 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.61■□□□□ 0.09
UBCP0CG48 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 LINC00602-201ENST00000629776 2065 ntBASIC15.6■□□□□ 0.09
UBCP0CG48 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 INGX-201ENST00000359239 846 ntBASIC15.6■□□□□ 0.09
UBCP0CG48 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.6■□□□□ 0.09
UBCP0CG48 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.6■□□□□ 0.09
UBCP0CG48 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 LINC01451-201ENST00000623792 534 ntBASIC15.6■□□□□ 0.09
UBCP0CG48 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
UBCP0CG48 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.6■□□□□ 0.09
UBCP0CG48 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
UBCP0CG48 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBCP0CG48 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 DDX43P3-201ENST00000441064 443 ntBASIC15.59■□□□□ 0.09
UBCP0CG48 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.59■□□□□ 0.09
UBCP0CG48 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.59■□□□□ 0.09
UBCP0CG48 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.59■□□□□ 0.09
UBCP0CG48 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 FAM87A-204ENST00000613235 858 ntBASIC15.59■□□□□ 0.09
UBCP0CG48 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms