Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC175P0C221 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
CCDC175P0C221 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC175P0C221 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC175P0C221 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC175P0C221 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
CCDC175P0C221 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC175P0C221 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 ID1-201ENST00000376105 1233 ntBASIC19.18■□□□□ 0.66
CCDC175P0C221 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC175P0C221 CRYGFP-201ENST00000418459 633 ntBASIC19.18■□□□□ 0.66
CCDC175P0C221 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC175P0C221 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC175P0C221 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 NFIC-211ENST00000641145 8399 ntBASIC19.18■□□□□ 0.66
CCDC175P0C221 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC175P0C221 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC175P0C221 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC175P0C221 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC175P0C221 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC175P0C221 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 LINC00167-201ENST00000530583 1419 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC175P0C221 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC175P0C221 AC060834.1-201ENST00000443027 2032 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CCDC175P0C221 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC175P0C221 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC175P0C221 NUDT16P1-203ENST00000513809 620 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 RPPH1-201ENST00000516869 333 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 AP003041.3-201ENST00000527151 707 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC175P0C221 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC175P0C221 AC008687.5-201ENST00000593746 558 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 AC010240.3-201ENST00000607688 395 ntBASIC19.17■□□□□ 0.66
CCDC175P0C221 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC175P0C221 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CCDC175P0C221 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC175P0C221 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms