Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGN1P05114 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGN1P05114 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMGN1P05114 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 AC022211.2-201ENST00000585075 2527 ntBASIC16.11■□□□□ 0.17
HMGN1P05114 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 GCSHP5-201ENST00000443090 522 ntBASIC16.11■□□□□ 0.17
HMGN1P05114 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 AL512604.3-201ENST00000569583 964 ntBASIC16.11■□□□□ 0.17
HMGN1P05114 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
HMGN1P05114 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HMGN1P05114 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGN1P05114 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGN1P05114 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGN1P05114 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGN1P05114 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGN1P05114 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 AC084018.2-201ENST00000613093 2607 ntBASIC16.1■□□□□ 0.17
HMGN1P05114 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGN1P05114 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGN1P05114 AC113404.2-201ENST00000507884 177 ntBASIC16.1■□□□□ 0.17
HMGN1P05114 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGN1P05114 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 AC024243.1-201ENST00000609234 778 ntBASIC16.1■□□□□ 0.17
HMGN1P05114 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGN1P05114 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGN1P05114 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGN1P05114 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGN1P05114 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 NKILA-202ENST00000614771 2598 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGN1P05114 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HMGN1P05114 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 TSPY14P-201ENST00000303979 915 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.09■□□□□ 0.17
HMGN1P05114 PVRIG2P-201ENST00000435460 978 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 TSPY20P-201ENST00000450910 630 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 AC128688.1-201ENST00000487626 519 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 EGLN1P1-201ENST00000531623 762 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 MIR3917-201ENST00000580971 93 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 MIR4785-201ENST00000585005 73 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.09■□□□□ 0.17
HMGN1P05114 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 AP000525.1-201ENST00000608286 694 ntBASIC16.09■□□□□ 0.17
HMGN1P05114 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms