Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.57■□□□□ 0.08
LCATP04180 IGHGP-201ENST00000390555 1178 ntBASIC15.57■□□□□ 0.08
LCATP04180 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.57■□□□□ 0.08
LCATP04180 KRT18P21-201ENST00000515767 1272 ntBASIC15.57■□□□□ 0.08
LCATP04180 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.57■□□□□ 0.08
LCATP04180 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.57■□□□□ 0.08
LCATP04180 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.57■□□□□ 0.08
LCATP04180 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.57■□□□□ 0.08
LCATP04180 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.57■□□□□ 0.08
LCATP04180 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.57■□□□□ 0.08
LCATP04180 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.57■□□□□ 0.08
LCATP04180 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCATP04180 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LCATP04180 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.56■□□□□ 0.08
LCATP04180 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 VENTXP5-201ENST00000523979 775 ntBASIC15.56■□□□□ 0.08
LCATP04180 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.56■□□□□ 0.08
LCATP04180 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.56■□□□□ 0.08
LCATP04180 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 GPR32P1-201ENST00000601788 811 ntBASIC15.56■□□□□ 0.08
LCATP04180 HYMAI.1-201ENST00000620949 238 ntBASIC15.56■□□□□ 0.08
LCATP04180 AC009154.2-201ENST00000621177 724 ntBASIC15.56■□□□□ 0.08
LCATP04180 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 AL353692.3-201ENST00000407031 1396 ntBASIC15.56■□□□□ 0.08
LCATP04180 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.56■□□□□ 0.08
LCATP04180 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 LINC00896-202ENST00000609602 2128 ntBASIC15.56■□□□□ 0.08
LCATP04180 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCATP04180 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.56■□□□□ 0.08
LCATP04180 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.55■□□□□ 0.08
LCATP04180 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.55■□□□□ 0.08
LCATP04180 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.55■□□□□ 0.08
LCATP04180 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.55■□□□□ 0.08
LCATP04180 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.55■□□□□ 0.08
LCATP04180 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.55■□□□□ 0.08
LCATP04180 AL671277.2-201ENST00000458060 996 ntBASIC15.55■□□□□ 0.08
LCATP04180 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.55■□□□□ 0.08
LCATP04180 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.55■□□□□ 0.08
LCATP04180 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCATP04180 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LCATP04180 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms