Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL1A1P02452 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.26■□□□□ 0.99
COL1A1P02452 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
COL1A1P02452 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A1P02452 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.26■□□□□ 0.99
COL1A1P02452 AC002558.1-201ENST00000488906 803 ntBASIC21.26■□□□□ 0.99
COL1A1P02452 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.26■□□□□ 0.99
COL1A1P02452 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.26■□□□□ 0.99
COL1A1P02452 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.26■□□□□ 0.99
COL1A1P02452 AC027796.2-201ENST00000575326 344 ntBASIC21.26■□□□□ 0.99
COL1A1P02452 AL589182.2-201ENST00000619332 1049 ntBASIC21.26■□□□□ 0.99
COL1A1P02452 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.26■□□□□ 0.99
COL1A1P02452 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A1P02452 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL1A1P02452 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A1P02452 NCF1C-201ENST00000438382 1427 ntBASIC21.25■□□□□ 0.99
COL1A1P02452 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL1A1P02452 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.25■□□□□ 0.99
COL1A1P02452 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.25■□□□□ 0.99
COL1A1P02452 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL1A1P02452 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL1A1P02452 DNAJB3-202ENST00000449667 1266 ntBASIC21.25■□□□□ 0.99
COL1A1P02452 AC108751.1-201ENST00000490852 363 ntBASIC21.25■□□□□ 0.99
COL1A1P02452 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.25■□□□□ 0.99
COL1A1P02452 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.25■□□□□ 0.99
COL1A1P02452 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.25■□□□□ 0.99
COL1A1P02452 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A1P02452 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 ABALON-201ENST00000629058 1903 ntBASIC21.24■□□□□ 0.99
COL1A1P02452 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
COL1A1P02452 MTDHP5-201ENST00000598980 586 ntBASIC21.24■□□□□ 0.99
COL1A1P02452 AC064836.3-201ENST00000607928 673 ntBASIC21.24■□□□□ 0.99
COL1A1P02452 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A1P02452 AC116407.2-201ENST00000613639 860 ntBASIC21.24■□□□□ 0.99
COL1A1P02452 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A1P02452 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL1A1P02452 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A1P02452 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A1P02452 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.23■□□□□ 0.99
COL1A1P02452 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL1A1P02452 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.23■□□□□ 0.99
COL1A1P02452 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.23■□□□□ 0.99
COL1A1P02452 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.23■□□□□ 0.99
COL1A1P02452 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.23■□□□□ 0.99
COL1A1P02452 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms