Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-AP01891 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.03■□□□□ -0
HLA-AP01891 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.03■□□□□ -0
HLA-AP01891 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-AP01891 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-AP01891 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-AP01891 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-AP01891 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
HLA-AP01891 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-AP01891 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.03■□□□□ -0
HLA-AP01891 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.02■□□□□ -0
HLA-AP01891 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HLA-AP01891 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.02■□□□□ -0
HLA-AP01891 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.02■□□□□ -0
HLA-AP01891 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 MIR564-202ENST00000385049 94 ntBASIC15.02■□□□□ -0
HLA-AP01891 AL158047.1-201ENST00000445918 881 ntBASIC15.02■□□□□ -0
HLA-AP01891 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.02■□□□□ -0
HLA-AP01891 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.02■□□□□ -0
HLA-AP01891 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-AP01891 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.02■□□□□ -0
HLA-AP01891 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-AP01891 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.02■□□□□ -0
HLA-AP01891 FAM197Y4-202ENST00000622692 608 ntBASIC15.02■□□□□ -0
HLA-AP01891 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.02■□□□□ -0
HLA-AP01891 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.02■□□□□ -0
HLA-AP01891 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-AP01891 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-AP01891 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-AP01891 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-AP01891 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-AP01891 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-AP01891 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-AP01891 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-AP01891 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HLA-AP01891 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-AP01891 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 FLJ38576-201ENST00000623820 2459 ntBASIC15.01□□□□□ -0.01
HLA-AP01891 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-AP01891 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-AP01891 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
HLA-AP01891 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-AP01891 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-AP01891 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-AP01891 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.01□□□□□ -0.01
HLA-AP01891 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-AP01891 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-AP01891 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-AP01891 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15□□□□□ -0.01
HLA-AP01891 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15□□□□□ -0.01
HLA-AP01891 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15□□□□□ -0.01
HLA-AP01891 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-AP01891 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-AP01891 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms