Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 AL355312.1-201ENST00000407115 2176 ntBASIC16.82■□□□□ 0.28
CLPTM1O96005 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLPTM1O96005 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLPTM1O96005 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1O96005 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1O96005 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLPTM1O96005 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1O96005 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1O96005 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.81■□□□□ 0.28
CLPTM1O96005 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.81■□□□□ 0.28
CLPTM1O96005 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.81■□□□□ 0.28
CLPTM1O96005 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1O96005 Z99916.2-201ENST00000604037 246 ntBASIC16.81■□□□□ 0.28
CLPTM1O96005 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1O96005 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.81■□□□□ 0.28
CLPTM1O96005 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.81■□□□□ 0.28
CLPTM1O96005 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1O96005 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.8■□□□□ 0.28
CLPTM1O96005 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLPTM1O96005 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
CLPTM1O96005 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
CLPTM1O96005 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 HTR7P1-201ENST00000538670 1336 ntBASIC16.8■□□□□ 0.28
CLPTM1O96005 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLPTM1O96005 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLPTM1O96005 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.8■□□□□ 0.28
CLPTM1O96005 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1O96005 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1O96005 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
CLPTM1O96005 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1O96005 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 AL603756.1-201ENST00000606511 2163 ntBASIC16.79■□□□□ 0.28
CLPTM1O96005 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.79■□□□□ 0.28
CLPTM1O96005 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPTM1O96005 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLPTM1O96005 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CLPTM1O96005 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1O96005 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1O96005 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLPTM1O96005 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1O96005 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1O96005 RPS2P4-201ENST00000476944 856 ntBASIC16.79■□□□□ 0.28
CLPTM1O96005 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms