Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.87■□□□□ 0.45
VAPBO95292 AC112698.1-201ENST00000510299 916 ntBASIC17.87■□□□□ 0.45
VAPBO95292 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VAPBO95292 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.87■□□□□ 0.45
VAPBO95292 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPBO95292 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPBO95292 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VAPBO95292 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.86■□□□□ 0.45
VAPBO95292 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.86■□□□□ 0.45
VAPBO95292 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.86■□□□□ 0.45
VAPBO95292 AC005332.3-201ENST00000589904 676 ntBASIC17.86■□□□□ 0.45
VAPBO95292 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPBO95292 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VAPBO95292 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 LINC00304-203ENST00000565008 1864 ntBASIC17.86■□□□□ 0.45
VAPBO95292 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VAPBO95292 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPBO95292 AC009053.2-201ENST00000563701 2365 ntBASIC17.86■□□□□ 0.45
VAPBO95292 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
VAPBO95292 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VAPBO95292 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VAPBO95292 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.85■□□□□ 0.45
VAPBO95292 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.85■□□□□ 0.45
VAPBO95292 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 AC022616.7-201ENST00000525383 220 ntBASIC17.85■□□□□ 0.45
VAPBO95292 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 AC099398.1-201ENST00000567919 2776 ntBASIC17.85■□□□□ 0.45
VAPBO95292 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 RNF126P1-202ENST00000569893 925 ntBASIC17.85■□□□□ 0.45
VAPBO95292 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.85■□□□□ 0.45
VAPBO95292 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.85■□□□□ 0.45
VAPBO95292 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPBO95292 REXO1L11P-201ENST00000620964 1927 ntBASIC17.85■□□□□ 0.45
VAPBO95292 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPBO95292 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAPBO95292 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms