Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.76■□□□□ 0.11
ALX3O95076 SLC25A1P2-201ENST00000430693 912 ntBASIC15.76■□□□□ 0.11
ALX3O95076 TSPY17P-201ENST00000450329 467 ntBASIC15.76■□□□□ 0.11
ALX3O95076 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.76■□□□□ 0.11
ALX3O95076 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.76■□□□□ 0.11
ALX3O95076 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.76■□□□□ 0.11
ALX3O95076 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.76■□□□□ 0.11
ALX3O95076 REXO1L10P-201ENST00000615707 1290 ntBASIC15.76■□□□□ 0.11
ALX3O95076 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ALX3O95076 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.76■□□□□ 0.11
ALX3O95076 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.76■□□□□ 0.11
ALX3O95076 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.76■□□□□ 0.11
ALX3O95076 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
ALX3O95076 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.76■□□□□ 0.11
ALX3O95076 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ALX3O95076 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
ALX3O95076 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 AL353719.1-201ENST00000566847 864 ntBASIC15.75■□□□□ 0.11
ALX3O95076 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.75■□□□□ 0.11
ALX3O95076 MIR4674-201ENST00000582457 87 ntBASIC15.75■□□□□ 0.11
ALX3O95076 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 AC113410.3-201ENST00000623366 203 ntBASIC15.75■□□□□ 0.11
ALX3O95076 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 AL049637.2-201ENST00000641778 930 ntBASIC15.75■□□□□ 0.11
ALX3O95076 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.75■□□□□ 0.11
ALX3O95076 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.75■□□□□ 0.11
ALX3O95076 PP12613-201ENST00000424958 2230 ntBASIC15.75■□□□□ 0.11
ALX3O95076 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ALX3O95076 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
ALX3O95076 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.74■□□□□ 0.11
ALX3O95076 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ALX3O95076 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.74■□□□□ 0.11
ALX3O95076 CRYGFP-201ENST00000418459 633 ntBASIC15.74■□□□□ 0.11
ALX3O95076 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ALX3O95076 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.74■□□□□ 0.11
ALX3O95076 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.74■□□□□ 0.11
ALX3O95076 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.74■□□□□ 0.11
ALX3O95076 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.74■□□□□ 0.11
ALX3O95076 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.74■□□□□ 0.11
ALX3O95076 AC093010.1-201ENST00000473625 1624 ntBASIC15.74■□□□□ 0.11
ALX3O95076 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.74■□□□□ 0.11
ALX3O95076 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ALX3O95076 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.74■□□□□ 0.11
ALX3O95076 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ALX3O95076 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ALX3O95076 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms