Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF8O76064 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 KRT18P21-201ENST00000515767 1272 ntBASIC18.72■□□□□ 0.59
RNF8O76064 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF8O76064 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 AC005332.3-201ENST00000589904 676 ntBASIC18.72■□□□□ 0.59
RNF8O76064 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF8O76064 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF8O76064 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF8O76064 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF8O76064 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF8O76064 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF8O76064 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF8O76064 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.71■□□□□ 0.59
RNF8O76064 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RNF8O76064 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF8O76064 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 AC083849.1-201ENST00000615227 514 ntBASIC18.71■□□□□ 0.59
RNF8O76064 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF8O76064 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF8O76064 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
RNF8O76064 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF8O76064 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RNF8O76064 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF8O76064 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF8O76064 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.58
RNF8O76064 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF8O76064 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF8O76064 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF8O76064 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF8O76064 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 Z83836.1-201ENST00000624605 1642 ntBASIC18.7■□□□□ 0.58
RNF8O76064 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF8O76064 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF8O76064 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF8O76064 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF8O76064 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
RNF8O76064 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 AC112698.1-201ENST00000510299 916 ntBASIC18.69■□□□□ 0.58
RNF8O76064 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF8O76064 AL390719.2-201ENST00000606993 987 ntBASIC18.69■□□□□ 0.58
RNF8O76064 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF8O76064 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF8O76064 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF8O76064 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF8O76064 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF8O76064 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF8O76064 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF8O76064 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF8O76064 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF8O76064 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF8O76064 AC009949.1-201ENST00000623048 1830 ntBASIC18.68■□□□□ 0.58
RNF8O76064 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF8O76064 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF8O76064 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms