Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNND1O60716 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNND1O60716 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.67■□□□□ 0.9
CTNND1O60716 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNND1O60716 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNND1O60716 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNND1O60716 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNND1O60716 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.66■□□□□ 0.9
CTNND1O60716 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.66■□□□□ 0.9
CTNND1O60716 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 AC008667.4-201ENST00000607370 168 ntBASIC20.66■□□□□ 0.9
CTNND1O60716 AC116407.2-201ENST00000613639 860 ntBASIC20.66■□□□□ 0.9
CTNND1O60716 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 AC002310.6-201ENST00000624451 1377 ntBASIC20.66■□□□□ 0.9
CTNND1O60716 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTNND1O60716 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNND1O60716 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 AC211486.1-202ENST00000416371 468 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 PRSS29P-201ENST00000440800 595 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 VN2R19P-201ENST00000442399 1052 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 DNAJB3-202ENST00000449667 1266 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 AC108073.2-201ENST00000464002 357 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 RPS15P9-201ENST00000494093 319 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 AC211476.1-201ENST00000503899 468 ntBASIC20.65■□□□□ 0.9
CTNND1O60716 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNND1O60716 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNND1O60716 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNND1O60716 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.65■□□□□ 0.9
CTNND1O60716 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNND1O60716 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNND1O60716 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNND1O60716 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTNND1O60716 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTNND1O60716 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNND1O60716 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTNND1O60716 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 AP006288.1-201ENST00000446065 395 ntBASIC20.64■□□□□ 0.89
CTNND1O60716 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.64■□□□□ 0.89
CTNND1O60716 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 AC005829.1-201ENST00000570002 483 ntBASIC20.64■□□□□ 0.89
CTNND1O60716 AC109462.3-201ENST00000573934 613 ntBASIC20.64■□□□□ 0.89
CTNND1O60716 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 AC093677.2-201ENST00000600169 1863 ntBASIC20.64■□□□□ 0.89
CTNND1O60716 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTNND1O60716 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNND1O60716 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNND1O60716 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CTNND1O60716 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CTNND1O60716 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTNND1O60716 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNND1O60716 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms