Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 RBM17P3-201ENST00000417687 1192 ntBASIC15.97■□□□□ 0.15
ZIC3O60481 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.97■□□□□ 0.15
ZIC3O60481 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 MTDHP3-201ENST00000594186 672 ntBASIC15.97■□□□□ 0.15
ZIC3O60481 AL121912.1-201ENST00000603683 238 ntBASIC15.97■□□□□ 0.15
ZIC3O60481 AL355877.3-201ENST00000622820 899 ntBASIC15.97■□□□□ 0.15
ZIC3O60481 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.97■□□□□ 0.15
ZIC3O60481 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.97■□□□□ 0.15
ZIC3O60481 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.97■□□□□ 0.15
ZIC3O60481 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
ZIC3O60481 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 PMPCAP1-201ENST00000508114 1576 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.96■□□□□ 0.15
ZIC3O60481 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 REXO1L11P-201ENST00000620964 1927 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 KRT8P10-201ENST00000450021 1447 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
ZIC3O60481 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.96■□□□□ 0.15
ZIC3O60481 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.96■□□□□ 0.15
ZIC3O60481 AC008608.2-201ENST00000606089 416 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 AC019129.2-201ENST00000609837 1235 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 AL031008.1-201ENST00000619963 541 ntBASIC15.96■□□□□ 0.15
ZIC3O60481 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ZIC3O60481 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.96■□□□□ 0.15
ZIC3O60481 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZIC3O60481 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ZIC3O60481 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.96■□□□□ 0.14
ZIC3O60481 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.96■□□□□ 0.14
ZIC3O60481 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 FGFR3P6-201ENST00000457012 610 ntBASIC15.95■□□□□ 0.14
ZIC3O60481 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.95■□□□□ 0.14
ZIC3O60481 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.95■□□□□ 0.14
ZIC3O60481 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.95■□□□□ 0.14
ZIC3O60481 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZIC3O60481 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ZIC3O60481 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ZIC3O60481 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ZIC3O60481 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ZIC3O60481 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZIC3O60481 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZIC3O60481 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZIC3O60481 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms