Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 FAM8A6P-201ENST00000407496 1135 ntBASIC16.2■□□□□ 0.18
RNF13O43567 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF13O43567 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF13O43567 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF13O43567 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF13O43567 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF13O43567 AC024563.2-201ENST00000603282 481 ntBASIC16.2■□□□□ 0.18
RNF13O43567 AL136038.4-201ENST00000603606 1261 ntBASIC16.2■□□□□ 0.18
RNF13O43567 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RNF13O43567 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF13O43567 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF13O43567 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF13O43567 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF13O43567 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 AL391807.1-203ENST00000604392 2365 ntBASIC16.19■□□□□ 0.18
RNF13O43567 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
RNF13O43567 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF13O43567 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF13O43567 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF13O43567 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF13O43567 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 DUTP2-201ENST00000519164 463 ntBASIC16.19■□□□□ 0.18
RNF13O43567 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.19■□□□□ 0.18
RNF13O43567 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
RNF13O43567 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF13O43567 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 AL023806.1-201ENST00000603994 1649 ntBASIC16.19■□□□□ 0.18
RNF13O43567 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF13O43567 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF13O43567 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF13O43567 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF13O43567 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RNF13O43567 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF13O43567 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RNF13O43567 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RNF13O43567 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF13O43567 STARP1-201ENST00000397973 869 ntBASIC16.18■□□□□ 0.18
RNF13O43567 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF13O43567 AC117947.1-201ENST00000427448 529 ntBASIC16.18■□□□□ 0.18
RNF13O43567 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF13O43567 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF13O43567 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF13O43567 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF13O43567 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 CROCCP1-201ENST00000426910 5675 ntBASIC16.18■□□□□ 0.18
RNF13O43567 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF13O43567 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF13O43567 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms