Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMAD9O15198 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMAD9O15198 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
SMAD9O15198 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 REXO1L9P-201ENST00000604264 2108 ntBASIC16.15■□□□□ 0.18
SMAD9O15198 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 UPK3BP1-201ENST00000428678 509 ntBASIC16.15■□□□□ 0.18
SMAD9O15198 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.15■□□□□ 0.18
SMAD9O15198 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.15■□□□□ 0.18
SMAD9O15198 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 AC069148.1-201ENST00000608741 768 ntBASIC16.15■□□□□ 0.18
SMAD9O15198 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMAD9O15198 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SMAD9O15198 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SMAD9O15198 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
SMAD9O15198 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SMAD9O15198 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 ABALON-201ENST00000629058 1903 ntBASIC16.14■□□□□ 0.17
SMAD9O15198 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 TSPY12P-201ENST00000421279 868 ntBASIC16.14■□□□□ 0.17
SMAD9O15198 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.14■□□□□ 0.17
SMAD9O15198 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
SMAD9O15198 TSSC2-201ENST00000450217 709 ntBASIC16.14■□□□□ 0.17
SMAD9O15198 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.14■□□□□ 0.17
SMAD9O15198 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.14■□□□□ 0.17
SMAD9O15198 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.14■□□□□ 0.17
SMAD9O15198 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.14■□□□□ 0.17
SMAD9O15198 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SMAD9O15198 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.14■□□□□ 0.17
SMAD9O15198 AC099398.1-201ENST00000567919 2776 ntBASIC16.14■□□□□ 0.17
SMAD9O15198 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD9O15198 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD9O15198 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD9O15198 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD9O15198 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD9O15198 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SMAD9O15198 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD9O15198 CHCHD2P8-201ENST00000429873 447 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms