Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 ABALON-201ENST00000629058 1903 ntBASIC21.31■■□□□ 1
SEMA3EO15041 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.31■■□□□ 1
SEMA3EO15041 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.31■■□□□ 1
SEMA3EO15041 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 AC034105.1-201ENST00000563488 319 ntBASIC21.31■■□□□ 1
SEMA3EO15041 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.31■■□□□ 1
SEMA3EO15041 AL356488.2-201ENST00000602755 427 ntBASIC21.31■■□□□ 1
SEMA3EO15041 AC004706.3-202ENST00000621574 984 ntBASIC21.31■■□□□ 1
SEMA3EO15041 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.31■■□□□ 1
SEMA3EO15041 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.31■■□□□ 1
SEMA3EO15041 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SEMA3EO15041 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SEMA3EO15041 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 NCF1C-201ENST00000438382 1427 ntBASIC21.3■■□□□ 1
SEMA3EO15041 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SEMA3EO15041 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SEMA3EO15041 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 STK19B-204ENST00000512515 211 ntBASIC21.3■■□□□ 1
SEMA3EO15041 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.3■■□□□ 1
SEMA3EO15041 MIR1199-201ENST00000621445 119 ntBASIC21.3■■□□□ 1
SEMA3EO15041 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 AC009336.1-201ENST00000608941 1553 ntBASIC21.3■■□□□ 1
SEMA3EO15041 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
SEMA3EO15041 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
SEMA3EO15041 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.29■■□□□ 1
SEMA3EO15041 AC104581.1-202ENST00000635932 2618 ntBASIC21.29■■□□□ 1
SEMA3EO15041 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.29■■□□□ 1
SEMA3EO15041 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.29■■□□□ 1
SEMA3EO15041 AC136632.2-201ENST00000512891 861 ntBASIC21.29■■□□□ 1
SEMA3EO15041 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.29■■□□□ 1
SEMA3EO15041 UNC93B6-202ENST00000528242 690 ntBASIC21.29■■□□□ 1
SEMA3EO15041 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.29■■□□□ 1
SEMA3EO15041 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
SEMA3EO15041 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEMA3EO15041 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEMA3EO15041 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.28■■□□□ 1
SEMA3EO15041 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.28■■□□□ 1
SEMA3EO15041 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.28■■□□□ 1
SEMA3EO15041 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms