Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFA4O00483 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA4O00483 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFA4O00483 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.65□□□□□ -0.23
NDUFA4O00483 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NDUFA4O00483 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA4O00483 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA4O00483 LINC00896-202ENST00000609602 2128 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NDUFA4O00483 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NDUFA4O00483 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NDUFA4O00483 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NDUFA4O00483 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NDUFA4O00483 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA4O00483 IER3-202ENST00000376377 1350 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NDUFA4O00483 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.64□□□□□ -0.23
NDUFA4O00483 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 AC246785.2-201ENST00000432512 513 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.64□□□□□ -0.23
NDUFA4O00483 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA4O00483 AL353801.3-201ENST00000609898 542 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NDUFA4O00483 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA4O00483 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 HLA-J-201ENST00000462773 1622 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.64□□□□□ -0.23
NDUFA4O00483 PCDHB18P-201ENST00000524813 2368 ntBASIC13.64□□□□□ -0.23
NDUFA4O00483 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA4O00483 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA4O00483 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NDUFA4O00483 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.63□□□□□ -0.23
NDUFA4O00483 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.63□□□□□ -0.23
NDUFA4O00483 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.63□□□□□ -0.23
NDUFA4O00483 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 AP000550.4-202ENST00000639755 178 ntBASIC13.63□□□□□ -0.23
NDUFA4O00483 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 AL355312.1-201ENST00000407115 2176 ntBASIC13.63□□□□□ -0.23
NDUFA4O00483 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA4O00483 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NDUFA4O00483 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFA4O00483 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA4O00483 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFA4O00483 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA4O00483 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 LINC00304-203ENST00000565008 1864 ntBASIC13.62□□□□□ -0.23
NDUFA4O00483 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 TSSC2-201ENST00000450217 709 ntBASIC13.62□□□□□ -0.23
NDUFA4O00483 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFA4O00483 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NDUFA4O00483 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms