Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 AL354751.1-201ENST00000412768 1863 ntBASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 AC106795.1-205ENST00000512851 1056 ntBASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA3F8WFD2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AL022342.1-201ENST00000400363 863 ntBASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 KRT18P65-201ENST00000439811 1286 ntBASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 FAM197Y8-203ENST00000450145 560 ntBASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AC009533.2-201ENST00000543664 586 ntBASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AC064862.7-201ENST00000604520 867 ntBASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA3F8WFD2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AC093010.1-201ENST00000473625 1624 ntBASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AC008608.2-201ENST00000606089 416 ntBASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 TP73-AS1-207ENST00000624167 988 ntBASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms