Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.55■□□□□ 0.88
USP17L11C9JVI0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L11C9JVI0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP17L11C9JVI0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
USP17L11C9JVI0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AL139424.1-201ENST00000607572 797 ntBASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AL691403.2-201ENST00000618460 490 ntBASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AC073592.5-201ENST00000624854 528 ntBASIC20.54■□□□□ 0.88
USP17L11C9JVI0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP17L11C9JVI0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 AC073621.1-201ENST00000392730 636 ntBASIC20.53■□□□□ 0.88
USP17L11C9JVI0 RPSAP43-201ENST00000402237 625 ntBASIC20.53■□□□□ 0.88
USP17L11C9JVI0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 AC010327.4-202ENST00000591484 748 ntBASIC20.53■□□□□ 0.88
USP17L11C9JVI0 AC005593.1-201ENST00000624894 515 ntBASIC20.53■□□□□ 0.88
USP17L11C9JVI0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.53■□□□□ 0.88
USP17L11C9JVI0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 YBX2P1-201ENST00000394192 760 ntBASIC20.52■□□□□ 0.88
USP17L11C9JVI0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 AC007967.2-201ENST00000432613 625 ntBASIC20.52■□□□□ 0.88
USP17L11C9JVI0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP17L11C9JVI0 AP000997.3-201ENST00000623333 2250 ntBASIC20.52■□□□□ 0.88
USP17L11C9JVI0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms