Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AC116407.2-201ENST00000613639 860 ntBASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AL022326.1-202ENST00000641533 845 ntBASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AC107918.4-202ENST00000641623 219 ntBASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AC004817.3-201ENST00000602957 2129 ntBASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TBC1D3FA6NER0 AC104109.2-201ENST00000602919 1418 ntBASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 AC098831.1-202ENST00000438821 336 ntBASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 IGHV3-22-201ENST00000520721 359 ntBASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 AC105339.3-201ENST00000560043 636 ntBASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 PMS2P7-201ENST00000506558 1336 ntBASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TBC1D3FA6NER0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.64■□□□□ 0.42
TBC1D3FA6NER0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3FA6NER0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3FA6NER0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3FA6NER0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3FA6NER0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 REXO1L9P-201ENST00000604264 2108 ntBASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 AC006538.3-201ENST00000612495 578 ntBASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 AC073592.5-201ENST00000624854 528 ntBASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3FA6NER0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms