Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 AC239800.4-201ENST00000603712 296 ntBASIC20.52■□□□□ 0.88
SSC5DA1L4H1 REXO1L3P-201ENST00000622202 1288 ntBASIC20.52■□□□□ 0.88
SSC5DA1L4H1 AC009093.7-201ENST00000623853 1223 ntBASIC20.52■□□□□ 0.88
SSC5DA1L4H1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.52■□□□□ 0.88
SSC5DA1L4H1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSC5DA1L4H1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AC002558.1-201ENST00000488906 803 ntBASIC20.51■□□□□ 0.87
SSC5DA1L4H1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AL121761.2-201ENST00000598007 1648 ntBASIC20.51■□□□□ 0.87
SSC5DA1L4H1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 ACTG1P4-201ENST00000425123 1122 ntBASIC20.51■□□□□ 0.87
SSC5DA1L4H1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 AC099522.2-201ENST00000607001 744 ntBASIC20.51■□□□□ 0.87
SSC5DA1L4H1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.51■□□□□ 0.87
SSC5DA1L4H1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 AC004449.1-201ENST00000564240 433 ntBASIC20.5■□□□□ 0.87
SSC5DA1L4H1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.5■□□□□ 0.87
SSC5DA1L4H1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSC5DA1L4H1 AC093677.2-201ENST00000600169 1863 ntBASIC20.49■□□□□ 0.87
SSC5DA1L4H1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 LINC00628-201ENST00000628516 1289 ntBASIC20.49■□□□□ 0.87
SSC5DA1L4H1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.49■□□□□ 0.87
SSC5DA1L4H1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSC5DA1L4H1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSC5DA1L4H1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSC5DA1L4H1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSC5DA1L4H1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSC5DA1L4H1 PI4KAP1-204ENST00000612579 1703 ntBASIC20.48■□□□□ 0.87
SSC5DA1L4H1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms