Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 TMEM191A-211ENST00000637163 1067 ntBASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AC034232.1-201ENST00000506026 1064 ntBASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AC141257.4-201ENST00000634557 245 ntBASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 AC136944.6-201ENST00000634818 245 ntBASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TCRBV9S1A1TA0A576 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 AL138966.2-201ENST00000621997 464 ntBASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 AC079602.3-201ENST00000623931 403 ntBASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV9S1A1TA0A576 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 LYSMD4-203ENST00000378904 2122 ntBASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms