Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 AC092597.1-201ENST00000487352 616 ntBASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 AC006011.2-201ENST00000621313 1158 ntBASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 AC112907.2-201ENST00000448639 330 ntBASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 AC113404.2-201ENST00000507884 177 ntBASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 DUTP2-201ENST00000519164 463 ntBASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 LINC01238-205ENST00000567549 1107 ntBASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TRGV1A0A0A0MS02 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 KRT89P-201ENST00000620027 1478 ntBASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms