Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 AC141586.5-201ENST00000624546 2050 ntBASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 MCCD1P1-208ENST00000445732 328 ntBASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 SEC1P-202ENST00000473944 940 ntBASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
DDX49Q9Y6V7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 AC092119.3-201ENST00000612618 583 ntBASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 AL157888.1-201ENST00000631930 593 ntBASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX49Q9Y6V7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 KRT8P3-201ENST00000519669 1449 ntBASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX49Q9Y6V7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms