Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC010327.4-202ENST00000591484 748 ntBASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX11Q9Y5W9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 AC005332.8-201ENST00000622750 2735 ntBASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX11Q9Y5W9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AC007967.3-201ENST00000434308 558 ntBASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SNX11Q9Y5W9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX11Q9Y5W9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 RPSAP43-201ENST00000402237 625 ntBASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 BX005266.1-201ENST00000473402 457 ntBASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SNX11Q9Y5W9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms