Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TSPY12P-201ENST00000421279 868 ntBASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 AL591684.3-201ENST00000605187 298 ntBASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA3Q9Y5H0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AP001005.1-201ENST00000571755 1248 ntBASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 GPALPP1-207ENST00000611650 899 ntBASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA3Q9Y5H0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 RNA5SP419-201ENST00000515908 135 ntBASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 AC006538.3-201ENST00000612495 578 ntBASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 TP73-AS1-207ENST00000624167 988 ntBASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 AC083906.6-201ENST00000641366 219 ntBASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA3Q9Y5H0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA3Q9Y5H0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms