Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC006504.4-201ENST00000592118 1568 ntBASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC003669.1-201ENST00000334569 611 ntBASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 KRT18P2-201ENST00000447938 1258 ntBASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC134684.3-201ENST00000641758 218 ntBASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 AC148477.5-201ENST00000625164 1645 ntBASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB7Q9Y5E2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 AC109462.3-201ENST00000573934 613 ntBASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB7Q9Y5E2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 ELK2BP-201ENST00000415014 1224 ntBASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB7Q9Y5E2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB7Q9Y5E2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms