Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 REXO1L10P-201ENST00000615707 1290 ntBASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 REXO1L12P-201ENST00000622156 912 ntBASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
UBE2D4Q9Y2X8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
UBE2D4Q9Y2X8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.4□□□□□ -0.43
UBE2D4Q9Y2X8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
UBE2D4Q9Y2X8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
UBE2D4Q9Y2X8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 REXO1L11P-201ENST00000620964 1927 ntBASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 AC009949.1-201ENST00000623048 1830 ntBASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D4Q9Y2X8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 LINC00167-201ENST00000530583 1419 ntBASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.38□□□□□ -0.43
UBE2D4Q9Y2X8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms