Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MRPL3P1-201ENST00000400109 1033 ntBASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 AL022342.1-201ENST00000400363 863 ntBASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 ESPNP-201ENST00000270691 2015 ntBASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AC093677.2-201ENST00000600169 1863 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AC018470.1-201ENST00000624790 3129 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 SDHAP2-201ENST00000455183 2001 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AC113404.2-201ENST00000507884 177 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 BNIP3P18-201ENST00000593976 575 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPA1Q9UND3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 AC106795.1-205ENST00000512851 1056 ntBASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 AF238378.1-201ENST00000526806 358 ntBASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 MIR5100-201ENST00000579544 119 ntBASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA1Q9UND3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms