Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC01311-201ENST00000565162 1445 ntBASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 AL645608.8-201ENST00000606034 2086 ntBASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 AC141586.5-201ENST00000624546 2050 ntBASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS29Q9UBQ0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 AC063952.2-201ENST00000498792 1227 ntBASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 AC005332.3-201ENST00000589904 676 ntBASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
VPS29Q9UBQ0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 AC068472.1-201ENST00000474589 881 ntBASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 VENTXP5-201ENST00000523979 775 ntBASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS29Q9UBQ0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 MTCL1P1-201ENST00000446207 792 ntBASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS29Q9UBQ0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms