Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT1Q9P2V4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT1Q9P2V4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT1Q9P2V4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT1Q9P2V4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AC009113.1-201ENST00000570267 2443 ntBASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AC145285.3-201ENST00000564603 959 ntBASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 AC093677.2-201ENST00000600169 1863 ntBASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.15■□□□□ 0.34
LRIT1Q9P2V4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 AC004817.3-201ENST00000602957 2129 ntBASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 LAGE3P1-201ENST00000425356 484 ntBASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT1Q9P2V4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC135776.1-201ENST00000319817 2481 ntBASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 RNA5SP415-201ENST00000517246 115 ntBASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC092865.5-201ENST00000545435 363 ntBASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC073592.4-201ENST00000623827 446 ntBASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 AC073592.5-201ENST00000624854 528 ntBASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT1Q9P2V4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms