Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 HCG4P8-203ENST00000443049 980 ntBASIC16.66■□□□□ 0.26
CNIH4Q9P003 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 AC092329.2-201ENST00000598402 547 ntBASIC16.66■□□□□ 0.26
CNIH4Q9P003 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 IGHV3-41-201ENST00000613121 348 ntBASIC16.66■□□□□ 0.26
CNIH4Q9P003 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.66■□□□□ 0.26
CNIH4Q9P003 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.65■□□□□ 0.26
CNIH4Q9P003 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 KRT18P1-202ENST00000452408 1331 ntBASIC16.65■□□□□ 0.26
CNIH4Q9P003 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNIH4Q9P003 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNIH4Q9P003 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.64■□□□□ 0.26
CNIH4Q9P003 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 AC004263.2-201ENST00000617183 678 ntBASIC16.64■□□□□ 0.25
CNIH4Q9P003 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 AC012313.1-201ENST00000593393 3059 ntBASIC16.64■□□□□ 0.25
CNIH4Q9P003 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 AC020916.1-201ENST00000587762 1774 ntBASIC16.64■□□□□ 0.25
CNIH4Q9P003 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CNIH4Q9P003 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH4Q9P003 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 DRAXINP1-201ENST00000437611 948 ntBASIC16.63■□□□□ 0.25
CNIH4Q9P003 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 KRT18P56-201ENST00000507275 550 ntBASIC16.63■□□□□ 0.25
CNIH4Q9P003 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH4Q9P003 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.63■□□□□ 0.25
CNIH4Q9P003 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms