Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF216Q9NWF9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AC008549.2-201ENST00000333482 706 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 RNU4-86P-201ENST00000410135 219 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 VN1R66P-201ENST00000412929 916 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 ZNF444P1-201ENST00000559497 298 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AP005136.2-201ENST00000583253 1049 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AC069148.1-201ENST00000608741 768 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AL118508.4-201ENST00000624142 1176 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 NIPA2P4-201ENST00000523928 1341 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AC005332.1-201ENST00000577698 1310 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 AL157902.2-201ENST00000623435 1492 ntBASIC20.66■□□□□ 0.9
RNF216Q9NWF9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF216Q9NWF9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AL133373.2-201ENST00000623187 2828 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 KC6-207ENST00000600644 2311 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC104794.2-201ENST00000567540 1572 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AK3P5-201ENST00000432033 519 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC112907.2-201ENST00000448639 330 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 HAUS1P3-201ENST00000523909 662 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 IL31RA-208ENST00000611895 1171 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AL050303.3-201ENST00000613704 284 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TP73-AS1-207ENST00000624167 988 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AC106733.1-201ENST00000624476 1038 ntBASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF216Q9NWF9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
RNF216Q9NWF9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 AL590240.2-201ENST00000413370 894 ntBASIC20.64■□□□□ 0.89
RNF216Q9NWF9 KRT18P48-201ENST00000434763 852 ntBASIC20.64■□□□□ 0.89
RNF216Q9NWF9 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 TPT1P6-201ENST00000458298 514 ntBASIC20.64■□□□□ 0.89
RNF216Q9NWF9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF216Q9NWF9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms