Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 AC091607.1-201ENST00000490318 1060 ntBASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 AP005901.3-202ENST00000581653 237 ntBASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 AC100803.2-201ENST00000562459 1963 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 IGHV3-47-201ENST00000425060 335 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 NUS1P1-201ENST00000446295 882 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 MINOS1P3-201ENST00000457048 203 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 PRELID1P1-202ENST00000567272 903 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 CLEC4GP1-201ENST00000596555 870 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 LINC01451-201ENST00000623792 534 ntBASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRDM9Q9NQV7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 BX276092.7-203ENST00000637198 1536 ntBASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PRDM9Q9NQV7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms