Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 AL023806.1-201ENST00000603994 1649 ntBASIC17.02■□□□□ 0.31
BRF2Q9HAW0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRF2Q9HAW0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AC097374.2-201ENST00000618617 1306 ntBASIC17.01■□□□□ 0.31
BRF2Q9HAW0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AL645929.1-201ENST00000420084 975 ntBASIC17.01■□□□□ 0.31
BRF2Q9HAW0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.01■□□□□ 0.31
BRF2Q9HAW0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AC141586.5-201ENST00000624546 2050 ntBASIC17.01■□□□□ 0.31
BRF2Q9HAW0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRF2Q9HAW0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 TMPOP1-202ENST00000424642 1267 ntBASIC17■□□□□ 0.31
BRF2Q9HAW0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17■□□□□ 0.31
BRF2Q9HAW0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BRF2Q9HAW0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BRF2Q9HAW0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BRF2Q9HAW0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
BRF2Q9HAW0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BRF2Q9HAW0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms